Submit an App
Submit a 3.0 App
Guide to 3.0 App Development
Sign In
All Apps
Categories
collections
(4)
data visualization
(76)
network generation
(60)
network analysis
(59)
graph analysis
(58)
online data import
(47)
automation
(44)
integrated analysis
(39)
clustering
(37)
systems biology
(33)
utility
(32)
enrichment analysis
(30)
visualization
(29)
data integration
(27)
layout
(21)
annotation
(21)
core app
(20)
ontology analysis
(18)
import
(18)
pathway database
(17)
network comparison
(17)
gene expression
(17)
local data import
(16)
functional analysis
(16)
interaction database
(14)
scripting
(13)
PPI-network
(13)
Network structure
(13)
network dynamics
(12)
GO annotation
(12)
regulatory networks
(11)
Topology
(10)
pathway
(10)
network inference
(10)
heat map visualization
(10)
networks
(9)
network manipulation
(9)
export
(9)
gene regulation
(8)
functional module detection
(8)
disease
(8)
database
(8)
cancer data analysis
(8)
attribute generation
(8)
animation
(8)
network partitioning
(7)
molecular structure
(7)
linked data
(7)
ID mapping
(7)
simulation
(6)
Random walk with restart algorithm
(6)
network learning
(6)
microarrays
(6)
grouping
(6)
gene-disease association
(6)
Connection sub-graph discovery
(6)
centrality analysis
(6)
social network analysis
(5)
shortest paths
(5)
sequence similarity
(5)
R
(5)
Protein complex
(5)
Pathway finding
(5)
network alignment
(5)
Gene prioritization
(5)
gene co-expression
(5)
data manipulation
(5)
3d visualization
(5)
structural biology
(4)
SPARQL
(4)
signaling
(4)
SBML
(4)
literature mining
(4)
kegg
(4)
JavaScript
(4)
gene function prediction
(4)
flux analysis
(4)
cluster visualization
(4)
variant analysis
(3)
set visualization
(3)
set analysis
(3)
search
(3)
python
(3)
protein dynamics
(3)
pathway reconstruction
(3)
network repository
(3)
inference
(3)
genome visualization
(3)
disease-disease association
(3)
bayesian networks
(3)
Social network analysis
Search for posts about social network analysis →
Ask a question about social network analysis →
cytoHubba
Predicts and explores important nodes and subnetworks in a given network by several topological algorithms.
cytoHubba
Predicts and explores important nodes and subnetworks in a given network by several topological algorithms.
(153) 45637 downloads
Motif-Discovery
It allows the user to do "Network Motif Discovery" in a fast and friendly way. It uses the G-Tries algorithm which is the fastest one.
Motif-Discovery
It allows the user to do "Network Motif Discovery" in a fast and friendly way. It uses the G-Tries algorithm which is the fastest one.
(11) 7354 downloads
SocialNetwork
Summarizes how individuals are connected by building networks where nodes represent authors and edges represent publications.
SocialNetwork
Summarizes how individuals are connected by building networks where nodes represent authors and edges represent publications.
(5) 8245 downloads
Diffusion
Expand node selection using network propagation algorithms
Diffusion
Expand node selection using network propagation algorithms
(35) 18283 downloads
PEmeasure
Compute links weights and assess the reliability of the links in a network (e.g. protein-protein interactions)
PEmeasure
Compute links weights and assess the reliability of the links in a network (e.g. protein-protein interactions)
(10) 2309 downloads
Unsupported Plugins for Cytoscape 2.x